Table 1 Genotypic patterns of unrelated E. coli strains by using Enterobacterial Repetitive Intergenic Consensus-Polymerase Chain Reaction (ERIC-PCR) fingerprinting
Strain no. | Strain code | Isolation source | Country | Genotypes | ||
|---|---|---|---|---|---|---|
ERIC-1R | ERIC-2 | ERIC-1R + ERIC2 | ||||
1 | ECSV1 | Imported frozen shrimp | Vietnam | A26 | B24 | C16 |
2 | ECSV2 | Imported frozen shrimp | Vietnam | A20 | B23 | C14 |
3 | ECSV3 | Imported frozen shrimp | Vietnam | A6 | B18 | C3 |
4 | ECSV4 | Imported frozen shrimp | Vietnam | A3 | B2 | C7 |
5 | ECSC5 | Imported frozen shrimp | China | A18 | B17 | C12 |
6 | ECSC6 | Imported frozen shrimp | China | A18 | B17 | C12 |
7 | ECSC7 | Imported frozen shrimp | China | A19 | B17 | C12 |
8 | ECSC8 | Imported frozen shrimp | China | A17 | B18 | NT* |
9 | ECSC9 | Imported frozen shrimp | China | A18 | B17 | C12 |
10 | ECSC12 | Imported frozen shrimp | China | A19 | B6 | NT |
11 | ECSC13 | Imported frozen shrimp | China | A19 | B6 | C12 |
12 | ECSC14 | Imported frozen shrimp | China | A1 | B1 | NT |
13 | ECSC15 | Imported frozen shrimp | China | A12 | B21 | C16 |
14 | ECSC16 | Imported frozen shrimp | China | A18 | B19 | C15 |
15 | ECSV17 | Imported frozen shrimp | Vietnam | A11 | B19 | C11 |
16 | ECSC18 | Imported frozen shrimp | China | A8 | B9 | C15 |
17 | ECSV19 | Imported frozen shrimp | Vietnam | A16 | B19 | C12 |
18 | ECSV20 | Imported frozen shrimp | Vietnam | A15 | B21 | C16 |
19 | ECSC21 | Imported frozen shrimp | China | A23 | B21 | C13 |
20 | ECSV22 | Imported frozen shrimp | Vietnam | A21 | B15 | NT |
21 | ECSV23 | Imported frozen shrimp | Vietnam | A21 | B13 | C15 |
22 | ECSC24 | Imported frozen shrimp | China | A25 | B22 | C15 |
23 | ECSV25 | Imported frozen shrimp | Vietnam | A25 | B3 | C12 |
24 | ECSV27 | Imported frozen shrimp | Vietnam | A21 | B3 | C14 |
25 | ECSV28 | Imported frozen shrimp | Vietnam | A24 | B12 | C12 |
26 | ECSV29 | Imported frozen shrimp | Vietnam | A7 | B16 | NT |
27 | ECSC30 | Imported frozen shrimp | China | A5 | B15 | C10 |
28 | ECSS31 | Human | Saudi Arabia | A5 | B5 | C9 |
29 | ECSS32 | Human | Saudi Arabia | A14 | B20 | C8 |
30 | ECSS33 | Human | Saudi Arabia | A22 | B14 | C2 |
31 | ECSS34 | Human | Saudi Arabia | A4 | B8 | C1 |
32 | ECSS35 | Human | Saudi Arabia | A2 | B15 | C7 |
33 | ECSS36 | Human | Saudi Arabia | A9 | B7 | NT |
34 | ECBI37 | Imported frozen Beef | India | A9 | B4 | C6 |
35 | ECBI38 | Imported frozen Beef | India | A3 | B19 | C3 |
36 | ECBI40 | Imported frozen Beef | India | A13 | B11 | C5 |
37 | ECBI41 | Imported frozen Beef | India | A13 | B10 | C5 |
38 | ECBI42 | Imported frozen Beef | India | A8 | B15 | C6 |
Number of types | 26 | 24 | 16 | |||
D value★ | 0.976 | 0.965 | 0.903 | |||